MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Granulicatella sp.
19428wC4_WM01
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 219
bases: 2,027,228 bps
CDS: 1,816
rRNA: 6
tRNA: 46
tmRNA: 1
Total number of protein coding genes annotated/found:
1,785
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5034|JADGLB010000004.1
MBF0779693.1
Genome Viewer
NA
AA
135/45
1-135
transposase
SEQF5034|JADGLB010000004.1
MBF0779694.1
Genome Viewer
NA
AA
591/197
1854-1264
hypothetical protein
SEQF5034|JADGLB010000004.1
MBF0779695.1
Genome Viewer
NA
AA
1503/501
3768-2266
carboxypeptidase M32
SEQF5034|JADGLB010000004.1
MBF0779696.1
Genome Viewer
NA
AA
516/172
4020-4535
thermonuclease family protein
SEQF5034|JADGLB010000004.1
MBF0779697.1
Genome Viewer
NA
AA
402/134
4598-4999
cytidine deaminase
SEQF5034|JADGLB010000004.1
MBF0779698.1
Genome Viewer
NA
AA
642/214
5012-5653
MBL fold metallo-hydrolase
SEQF5034|JADGLB010000004.1
MBF0779699.1
Genome Viewer
NA
AA
939/313
5650-6588
hypothetical protein
SEQF5034|JADGLB010000004.1
MBF0779700.1
Genome Viewer
NA
AA
450/150
6600-7049
signal peptidase II
SEQF5034|JADGLB010000004.1
MBF0779701.1
Genome Viewer
NA
AA
900/300
7042-7941
RluA family pseudouridine synthase
SEQF5034|JADGLB010000004.1
MBF0779702.1
Genome Viewer
NA
AA
1740/580
7989-9728
M3 family oligoendopeptidase
SEQF5034|JADGLB010000004.1
MBF0779703.1
Genome Viewer
NA
AA
897/299
10314-11210
deoxyribonuclease IV
SEQF5034|JADGLB010000004.1
MBF0779704.1
Genome Viewer
NA
AA
480/160
11213-11692
transcriptional repressor
SEQF5034|JADGLB010000004.1
MBF0779705.1
Genome Viewer
NA
AA
153/51
11790-11942
50S ribosomal protein L33
SEQF5034|JADGLB010000004.1
MBF0779706.1
Genome Viewer
NA
AA
174/58
11943-12116
preprotein translocase subunit SecE
SEQF5034|JADGLB010000004.1
MBF0779707.1
Genome Viewer
NA
AA
732/244
12235-12966
ABC transporter ATP-binding protein
SEQF5034|JADGLB010000004.1
MBF0779708.1
Genome Viewer
NA
AA
1185/395
12969-14153
ABC transporter permease
SEQF5034|JADGLB010000004.1
MBF0779709.1
Genome Viewer
NA
AA
780/260
14213-14992
phosphotransferase family protein
SEQF5034|JADGLB010000004.1
MBF0779710.1
Genome Viewer
NA
AA
657/219
15051-15707
tRNA (guanosine(46)-N7)-methyltransferase TrmB
SEQF5034|JADGLB010000004.1
MBF0779711.1
Genome Viewer
NA
AA
702/234
15781-16482
Bax inhibitor-1/YccA family protein
SEQF5034|JADGLB010000004.1
MBF0779712.1
Genome Viewer
NA
AA
303/101
16495-16797
hypothetical protein
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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